Cluster: CGMR008527_CGC12
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR008527
- CGC Family ID: CGCFAM_00614
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_42348 | k141_42348_81 | 94888 | 96657 | + | 1.B.52.2.1 |
| pfam | k141_42348 | k141_42348_82 | 96749 | 97306 | + | EFP | EFP_N | Elong-fact-P_C |
| NULL(UNKNOWN) | k141_42348 | k141_42348_83 | 97322 | 97531 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_42348 | k141_42348_84 | 97613 | 98299 | + | GH23 |
Gene ID: k141_42348_81
Type: TC
Location: 94888 - 96657 (+)
Type: TC
Location: 94888 - 96657 (+)
Gene ID: k141_42348_82
Type: pfam
Location: 96749 - 97306 (+)
Type: pfam
Location: 96749 - 97306 (+)
Gene ID: k141_42348_83
Type:
Location: 97322 - 97531 (+)
Type:
Location: 97322 - 97531 (+)
Gene ID: k141_42348_84
Type: CAZyme
Location: 97613 - 98299 (+)
Type: CAZyme
Location: 97613 - 98299 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.