Cluster: CGMR008527_CGC11
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR008527
- CGC Family ID: CGCFAM_01803
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_42348 | k141_42348_65 | 77732 | 80167 | - | GH94 |
| TF | k141_42348 | k141_42348_66 | 80579 | 81598 | + | LacI |
| NULL(UNKNOWN) | k141_42348 | k141_42348_67 | 81679 | 83073 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_42348 | k141_42348_68 | 83140 | 84132 | + | 3.A.1.1.23 |
| TC | k141_42348 | k141_42348_69 | 84122 | 84994 | + | 3.A.1.1.48 |
Gene ID: k141_42348_65
Type: CAZyme
Location: 77732 - 80167 (-)
Type: CAZyme
Location: 77732 - 80167 (-)
Gene ID: k141_42348_66
Type: TF
Location: 80579 - 81598 (+)
Type: TF
Location: 80579 - 81598 (+)
Gene ID: k141_42348_67
Type:
Location: 81679 - 83073 (+)
Type:
Location: 81679 - 83073 (+)
Gene ID: k141_42348_68
Type: TC
Location: 83140 - 84132 (+)
Type: TC
Location: 83140 - 84132 (+)
Gene ID: k141_42348_69
Type: TC
Location: 84122 - 84994 (+)
Type: TC
Location: 84122 - 84994 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.