Cluster: CGMR008527_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 4
- Substrate:
- Genome ID: CGMR008527
- CGC Family ID: CGCFAM_00466
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_42348 | k141_42348_44 | 48835 | 51087 | + | GH3 |
| CAZyme | k141_42348 | k141_42348_45 | 51150 | 53945 | + | CBM67 | GH78 |
| CAZyme | k141_42348 | k141_42348_46 | 53960 | 56608 | + | CBM67 | GH78 |
| pfam | k141_42348 | k141_42348_47 | 56617 | 57429 | + | Lipase_GDSL | Lipase_GDSL_2 |
| TC | k141_42348 | k141_42348_48 | 57533 | 58909 | + | 2.A.2.1.1 |
| CAZyme | k141_42348 | k141_42348_49 | 58933 | 61188 | + | GH3 |
Gene ID: k141_42348_44
Type: CAZyme
Location: 48835 - 51087 (+)
Type: CAZyme
Location: 48835 - 51087 (+)
Gene ID: k141_42348_45
Type: CAZyme
Location: 51150 - 53945 (+)
Type: CAZyme
Location: 51150 - 53945 (+)
Gene ID: k141_42348_46
Type: CAZyme
Location: 53960 - 56608 (+)
Type: CAZyme
Location: 53960 - 56608 (+)
Gene ID: k141_42348_47
Type: pfam
Location: 56617 - 57429 (+)
Type: pfam
Location: 56617 - 57429 (+)
Gene ID: k141_42348_48
Type: TC
Location: 57533 - 58909 (+)
Type: TC
Location: 57533 - 58909 (+)
Gene ID: k141_42348_49
Type: CAZyme
Location: 58933 - 61188 (+)
Type: CAZyme
Location: 58933 - 61188 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Pararoseburia
Species
Pararoseburia lenta
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.