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Cluster: CGMR008332_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_132372 k141_132372_7 5986 7092 + CE9
TC k141_132372 k141_132372_8 7256 8587 - 2.A.66.1.37
TF k141_132372 k141_132372_9 8675 9499 + MerR
pfam k141_132372 k141_132372_10 9500 10198 + Metallophos
TC k141_132372 k141_132372_11 10334 11494 + 3.A.1.4.10
TC k141_132372 k141_132372_12 11593 12477 + 3.A.1.4.10
TC k141_132372 k141_132372_13 12487 13554 + 3.A.1.4.8
TC k141_132372 k141_132372_14 13557 14315 + 3.A.1.4.10
TC k141_132372 k141_132372_15 14329 15039 + 3.A.1.4.10
TC k141_132372 k141_132372_16 15079 15702 + 2.A.115.2.14
Gene ID: k141_132372_7
Type: CAZyme
Location: 5986 - 7092 (+)
Gene ID: k141_132372_8
Type: TC
Location: 7256 - 8587 (-)
Gene ID: k141_132372_9
Type: TF
Location: 8675 - 9499 (+)
Gene ID: k141_132372_10
Type: pfam
Location: 9500 - 10198 (+)
Gene ID: k141_132372_11
Type: TC
Location: 10334 - 11494 (+)
Gene ID: k141_132372_12
Type: TC
Location: 11593 - 12477 (+)
Gene ID: k141_132372_13
Type: TC
Location: 12487 - 13554 (+)
Gene ID: k141_132372_14
Type: TC
Location: 13557 - 14315 (+)
Gene ID: k141_132372_15
Type: TC
Location: 14329 - 15039 (+)
Gene ID: k141_132372_16
Type: TC
Location: 15079 - 15702 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_132372_15 vegetarian > omnivore 1.11141 0.03673
k141_132372_15 vegetarian > vegan 1.32804 0.03984

🧭 Explore Read Mapping of CGC

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