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Cluster: CGMR008332_CGC19

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_64250 k141_64250_9 14902 16305 + 9.B.18.1.2
CAZyme k141_64250 k141_64250_10 16448 17776 + GT2
CAZyme k141_64250 k141_64250_11 17815 20274 + GT2 | GT2
pfam k141_64250 k141_64250_12 20304 21248 + Glycos_transf_2
pfam k141_64250 k141_64250_13 21235 22215 + LytR_cpsA_psr
TC k141_64250 k141_64250_14 22315 22998 + 9.B.27.1.1
pfam k141_64250 k141_64250_15 22988 23965 + CCG | CCG | Fer4_8 | Fer4_17
TC k141_64250 k141_64250_16 23971 24675 + 9.B.27.1.2
CAZyme k141_64250 k141_64250_17 24686 26023 + GT2
Gene ID: k141_64250_9
Type: TC
Location: 14902 - 16305 (+)
Gene ID: k141_64250_10
Type: CAZyme
Location: 16448 - 17776 (+)
Gene ID: k141_64250_11
Type: CAZyme
Location: 17815 - 20274 (+)
Gene ID: k141_64250_12
Type: pfam
Location: 20304 - 21248 (+)
Gene ID: k141_64250_13
Type: pfam
Location: 21235 - 22215 (+)
Gene ID: k141_64250_14
Type: TC
Location: 22315 - 22998 (+)
Gene ID: k141_64250_15
Type: pfam
Location: 22988 - 23965 (+)
Gene ID: k141_64250_16
Type: TC
Location: 23971 - 24675 (+)
Gene ID: k141_64250_17
Type: CAZyme
Location: 24686 - 26023 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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