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Cluster: CGMR008052_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_149180 k141_149180_16 11888 12646 - 3.A.1.7.5
TC k141_149180 k141_149180_17 12658 13527 - 3.A.1.7.5
TC k141_149180 k141_149180_18 13527 14459 - 3.A.1.7.5
pfam k141_149180 k141_149180_19 14478 15362 - PBP_like | PBP_like_2 | SBP_bac_11
TC k141_149180 k141_149180_20 15651 16646 - 3.A.1.11.1
TC k141_149180 k141_149180_21 16646 18310 - 3.A.1.20.3
TC k141_149180 k141_149180_22 18369 19472 - 3.A.1.20.2
pfam k141_149180 k141_149180_23 19556 20182 - PHP | PHP_C
pfam k141_149180 k141_149180_24 20303 22057 - LytR_cpsA_psr
TC k141_149180 k141_149180_25 22072 23490 - 9.B.18.1.1
CAZyme k141_149180 k141_149180_26 23804 24790 - GT2
CAZyme k141_149180 k141_149180_27 24813 27008 - GT2 | GT2
CAZyme k141_149180 k141_149180_28 27011 27979 - GT2
Gene ID: k141_149180_16
Type: TC
Location: 11888 - 12646 (-)
Gene ID: k141_149180_17
Type: TC
Location: 12658 - 13527 (-)
Gene ID: k141_149180_18
Type: TC
Location: 13527 - 14459 (-)
Gene ID: k141_149180_19
Type: pfam
Location: 14478 - 15362 (-)
Gene ID: k141_149180_20
Type: TC
Location: 15651 - 16646 (-)
Gene ID: k141_149180_21
Type: TC
Location: 16646 - 18310 (-)
Gene ID: k141_149180_22
Type: TC
Location: 18369 - 19472 (-)
Gene ID: k141_149180_23
Type: pfam
Location: 19556 - 20182 (-)
Gene ID: k141_149180_24
Type: pfam
Location: 20303 - 22057 (-)
Gene ID: k141_149180_25
Type: TC
Location: 22072 - 23490 (-)
Gene ID: k141_149180_26
Type: CAZyme
Location: 23804 - 24790 (-)
Gene ID: k141_149180_27
Type: CAZyme
Location: 24813 - 27008 (-)
Gene ID: k141_149180_28
Type: CAZyme
Location: 27011 - 27979 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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