Cluster: CGMR008052_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR008052
- CGC Family ID: CGCFAM_08071
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_11166 | k141_11166_1 | 1 | 600 | - | 3.A.1.103.5 |
| TC | k141_11166 | k141_11166_2 | 610 | 1398 | - | 3.A.1.103.4 |
| CAZyme | k141_11166 | k141_11166_3 | 1426 | 2376 | - | GT111 |
| TC | k141_11166 | k141_11166_4 | 2380 | 3741 | - | 9.B.18.1.3 |
Gene ID: k141_11166_1
Type: TC
Location: 1 - 600 (-)
Type: TC
Location: 1 - 600 (-)
Gene ID: k141_11166_2
Type: TC
Location: 610 - 1398 (-)
Type: TC
Location: 610 - 1398 (-)
Gene ID: k141_11166_3
Type: CAZyme
Location: 1426 - 2376 (-)
Type: CAZyme
Location: 1426 - 2376 (-)
Gene ID: k141_11166_4
Type: TC
Location: 2380 - 3741 (-)
Type: TC
Location: 2380 - 3741 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900556965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_11166_4 | omnivore > vegan | 2.90758 | 0.03058 |