Cluster: CGMR008052_CGC14
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR008052
- CGC Family ID: CGCFAM_00008
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_100570 | k141_100570_8 | 8073 | 9017 | + | GT2 |
| pfam | k141_100570 | k141_100570_9 | 9054 | 9629 | + | dTDP_sugar_isom |
| TC | k141_100570 | k141_100570_10 | 9659 | 10468 | + | 3.A.1.104.2 |
| TC | k141_100570 | k141_100570_11 | 10479 | 11831 | + | 3.A.1.103.6 |
| pfam | k141_100570 | k141_100570_12 | 11834 | 12688 | + | Methyltransf_11 |
| CAZyme | k141_100570 | k141_100570_13 | 12685 | 15819 | + | GT2 |
Gene ID: k141_100570_8
Type: CAZyme
Location: 8073 - 9017 (+)
Type: CAZyme
Location: 8073 - 9017 (+)
Gene ID: k141_100570_9
Type: pfam
Location: 9054 - 9629 (+)
Type: pfam
Location: 9054 - 9629 (+)
Gene ID: k141_100570_10
Type: TC
Location: 9659 - 10468 (+)
Type: TC
Location: 9659 - 10468 (+)
Gene ID: k141_100570_11
Type: TC
Location: 10479 - 11831 (+)
Type: TC
Location: 10479 - 11831 (+)
Gene ID: k141_100570_12
Type: pfam
Location: 11834 - 12688 (+)
Type: pfam
Location: 11834 - 12688 (+)
Gene ID: k141_100570_13
Type: CAZyme
Location: 12685 - 15819 (+)
Type: CAZyme
Location: 12685 - 15819 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900556965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.