Cluster: CGMR008052_CGC11
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR008052
- CGC Family ID: CGCFAM_03713
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_75742 | k141_75742_2 | 519 | 1553 | - | 2.A.86.1.3 |
| pfam | k141_75742 | k141_75742_3 | 1662 | 2351 | - | PseudoU_synth_2 |
| TC | k141_75742 | k141_75742_4 | 2556 | 3215 | + | 1.C.113.1.2 |
| peptidase | k141_75742 | k141_75742_5 | 3330 | 4883 | - | S11.UPW |
| pfam | k141_75742 | k141_75742_6 | 4873 | 5187 | - | GIY-YIG |
| CAZyme | k141_75742 | k141_75742_7 | 5427 | 6974 | - | CBM50 |
Gene ID: k141_75742_2
Type: TC
Location: 519 - 1553 (-)
Type: TC
Location: 519 - 1553 (-)
Gene ID: k141_75742_3
Type: pfam
Location: 1662 - 2351 (-)
Type: pfam
Location: 1662 - 2351 (-)
Gene ID: k141_75742_4
Type: TC
Location: 2556 - 3215 (+)
Type: TC
Location: 2556 - 3215 (+)
Gene ID: k141_75742_5
Type: peptidase
Location: 3330 - 4883 (-)
Type: peptidase
Location: 3330 - 4883 (-)
Gene ID: k141_75742_6
Type: pfam
Location: 4873 - 5187 (-)
Type: pfam
Location: 4873 - 5187 (-)
Gene ID: k141_75742_7
Type: CAZyme
Location: 5427 - 6974 (-)
Type: CAZyme
Location: 5427 - 6974 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Alitiscatomonas
Species
Alitiscatomonas sp900556965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.