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Cluster: CGMR008052_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_23538 k141_23538_2 319 1734 - 2.A.66.1.45
STP k141_23538 k141_23538_3 1967 3061 + ACT
STP k141_23538 k141_23538_4 3078 4358 + EPSP_synthase
CAZyme k141_23538 k141_23538_5 4410 5429 - GT2
pfam k141_23538 k141_23538_6 5754 6683 + AA_kinase
TC k141_23538 k141_23538_7 6841 7491 + 1.A.62.2.2
TC k141_23538 k141_23538_8 7552 8346 - 3.D.6.1.2
TC k141_23538 k141_23538_9 8362 8937 - 3.D.6.1.2
TC k141_23538 k141_23538_10 8953 9765 - 3.D.6.1.2
TC k141_23538 k141_23538_11 9779 10396 - 3.D.6.1.2
TC k141_23538 k141_23538_12 10383 11327 - 3.D.6.1.2
TC k141_23538 k141_23538_13 11340 12671 - 3.D.6.1.2
TC k141_23538 k141_23538_14 12877 14760 - 3.A.1.135.5
TC k141_23538 k141_23538_15 14754 16493 - 3.A.1.135.5
TF k141_23538 k141_23538_16 16490 16939 - MarR
TC k141_23538 k141_23538_17 17091 18443 - 2.A.66.1.33
Gene ID: k141_23538_2
Type: TC
Location: 319 - 1734 (-)
Gene ID: k141_23538_3
Type: STP
Location: 1967 - 3061 (+)
Gene ID: k141_23538_4
Type: STP
Location: 3078 - 4358 (+)
Gene ID: k141_23538_5
Type: CAZyme
Location: 4410 - 5429 (-)
Gene ID: k141_23538_6
Type: pfam
Location: 5754 - 6683 (+)
Gene ID: k141_23538_7
Type: TC
Location: 6841 - 7491 (+)
Gene ID: k141_23538_8
Type: TC
Location: 7552 - 8346 (-)
Gene ID: k141_23538_9
Type: TC
Location: 8362 - 8937 (-)
Gene ID: k141_23538_10
Type: TC
Location: 8953 - 9765 (-)
Gene ID: k141_23538_11
Type: TC
Location: 9779 - 10396 (-)
Gene ID: k141_23538_12
Type: TC
Location: 10383 - 11327 (-)
Gene ID: k141_23538_13
Type: TC
Location: 11340 - 12671 (-)
Gene ID: k141_23538_14
Type: TC
Location: 12877 - 14760 (-)
Gene ID: k141_23538_15
Type: TC
Location: 14754 - 16493 (-)
Gene ID: k141_23538_16
Type: TF
Location: 16490 - 16939 (-)
Gene ID: k141_23538_17
Type: TC
Location: 17091 - 18443 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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