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Cluster: CGMR007721_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_28305 k141_28305_35 43095 44153 - 4.D.2.1.5
pfam k141_28305 k141_28305_36 44125 44853 - PAP2_3
pfam k141_28305 k141_28305_37 45127 45552 + DUF2871
TC k141_28305 k141_28305_38 45900 46793 - 3.A.16.1.1
NULL(UNKNOWN) k141_28305 k141_28305_39 46795 47337 - NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_28305 k141_28305_40 47355 48368 - URO-D
CAZyme k141_28305 k141_28305_41 48393 49598 - GH109
CAZyme k141_28305 k141_28305_42 49647 52457 - GH2
CAZyme k141_28305 k141_28305_43 52488 54245 - GH36
Gene ID: k141_28305_35
Type: TC
Location: 43095 - 44153 (-)
Gene ID: k141_28305_36
Type: pfam
Location: 44125 - 44853 (-)
Gene ID: k141_28305_37
Type: pfam
Location: 45127 - 45552 (+)
Gene ID: k141_28305_38
Type: TC
Location: 45900 - 46793 (-)
Gene ID: k141_28305_39
Type:
Location: 46795 - 47337 (-)
Gene ID: k141_28305_40
Type: pfam
Location: 47355 - 48368 (-)
Gene ID: k141_28305_41
Type: CAZyme
Location: 48393 - 49598 (-)
Gene ID: k141_28305_42
Type: CAZyme
Location: 49647 - 52457 (-)
Gene ID: k141_28305_43
Type: CAZyme
Location: 52488 - 54245 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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