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Cluster: CGMR007721_CGC44

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_5260 k141_5260_18 11970 13904 - GH133
CAZyme k141_5260 k141_5260_19 13930 15870 - GH13_14
TC k141_5260 k141_5260_20 15879 16748 - 3.A.1.1.27
TC k141_5260 k141_5260_21 16751 18133 - 3.A.1.1.27
STP k141_5260 k141_5260_22 18149 19375 - SBP_bac_1
TF k141_5260 k141_5260_23 19819 20814 + LacI
TC k141_5260 k141_5260_24 20863 22650 - 3.A.1.106.3
TC k141_5260 k141_5260_25 22637 24379 - 3.A.1.106.3
TF k141_5260 k141_5260_26 24654 25496 + HTH_AraC | HTH_AraC
TC k141_5260 k141_5260_27 25561 26340 + 3.A.1.17.8
Gene ID: k141_5260_18
Type: CAZyme
Location: 11970 - 13904 (-)
Gene ID: k141_5260_19
Type: CAZyme
Location: 13930 - 15870 (-)
Gene ID: k141_5260_20
Type: TC
Location: 15879 - 16748 (-)
Gene ID: k141_5260_21
Type: TC
Location: 16751 - 18133 (-)
Gene ID: k141_5260_22
Type: STP
Location: 18149 - 19375 (-)
Gene ID: k141_5260_23
Type: TF
Location: 19819 - 20814 (+)
Gene ID: k141_5260_24
Type: TC
Location: 20863 - 22650 (-)
Gene ID: k141_5260_25
Type: TC
Location: 22637 - 24379 (-)
Gene ID: k141_5260_26
Type: TF
Location: 24654 - 25496 (+)
Gene ID: k141_5260_27
Type: TC
Location: 25561 - 26340 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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