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Cluster: CGMR007721_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_5695 k141_5695_90 91957 93321 + 2.A.25.1.3
TC k141_5695 k141_5695_91 93430 93954 + 9.B.156.3.1
TF k141_5695 k141_5695_92 94031 94474 + MarR
TF k141_5695 k141_5695_93 94452 95333 - HTH_AraC
CAZyme k141_5695 k141_5695_94 95458 98526 + GH2
NULL(UNKNOWN) k141_5695 k141_5695_95 98715 100418 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme k141_5695 k141_5695_96 100424 102511 + GH95
pfam k141_5695 k141_5695_97 102622 103032 - HEPN
STP k141_5695 k141_5695_98 103010 103336 - NTP_transf_2
TC k141_5695 k141_5695_99 103385 103990 - 9.B.156.3.1
Gene ID: k141_5695_90
Type: TC
Location: 91957 - 93321 (+)
Gene ID: k141_5695_91
Type: TC
Location: 93430 - 93954 (+)
Gene ID: k141_5695_92
Type: TF
Location: 94031 - 94474 (+)
Gene ID: k141_5695_93
Type: TF
Location: 94452 - 95333 (-)
Gene ID: k141_5695_94
Type: CAZyme
Location: 95458 - 98526 (+)
Gene ID: k141_5695_95
Type:
Location: 98715 - 100418 (+)
Gene ID: k141_5695_96
Type: CAZyme
Location: 100424 - 102511 (+)
Gene ID: k141_5695_97
Type: pfam
Location: 102622 - 103032 (-)
Gene ID: k141_5695_98
Type: STP
Location: 103010 - 103336 (-)
Gene ID: k141_5695_99
Type: TC
Location: 103385 - 103990 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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