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Cluster: CGMR007721_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_38808 k141_38808_82 98336 99292 - GT2
pfam k141_38808 k141_38808_83 99361 100443 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
pfam k141_38808 k141_38808_84 100494 100925 - DUF2304
CAZyme k141_38808 k141_38808_85 100935 101615 - GT2
pfam k141_38808 k141_38808_86 101644 103464 - Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Choline_bind_1 | Amidase_3 | Choline_bind_3 | Choline_bind_3
TC k141_38808 k141_38808_87 103602 103943 - 2.A.7.33.5
NULL(UNKNOWN) k141_38808 k141_38808_88 103936 104286 - NULL(UNKNOWN)
[View Structural Homologs]
STP k141_38808 k141_38808_89 104481 105440 + PALP
CAZyme k141_38808 k141_38808_90 105458 106450 + GT2
Gene ID: k141_38808_82
Type: CAZyme
Location: 98336 - 99292 (-)
Gene ID: k141_38808_83
Type: pfam
Location: 99361 - 100443 (-)
Gene ID: k141_38808_84
Type: pfam
Location: 100494 - 100925 (-)
Gene ID: k141_38808_85
Type: CAZyme
Location: 100935 - 101615 (-)
Gene ID: k141_38808_86
Type: pfam
Location: 101644 - 103464 (-)
Gene ID: k141_38808_87
Type: TC
Location: 103602 - 103943 (-)
Gene ID: k141_38808_88
Type:
Location: 103936 - 104286 (-)
Gene ID: k141_38808_89
Type: STP
Location: 104481 - 105440 (+)
Gene ID: k141_38808_90
Type: CAZyme
Location: 105458 - 106450 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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