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Cluster: CGMR007721_CGC20

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_45071 k141_45071_8 6290 7336 + 8.A.5.1.6
CAZyme k141_45071 k141_45071_9 7370 8839 + GH29
peptidase k141_45071 k141_45071_10 8914 10143 - M20.003
TF k141_45071 k141_45071_11 10163 11785 - HTH_AraC | HTH_AraC
TC k141_45071 k141_45071_12 11782 13593 - 8.A.59.2.1
STP k141_45071 k141_45071_13 13893 15275 + SBP_bac_1
TC k141_45071 k141_45071_14 15405 16331 + 3.A.1.1.7
TC k141_45071 k141_45071_15 16353 17198 + 3.A.1.1.11
pfam k141_45071 k141_45071_16 17224 17835 + DUF624
CAZyme k141_45071 k141_45071_17 17965 19671 + GH154
CAZyme k141_45071 k141_45071_18 19684 20844 + GH88
CAZyme k141_45071 k141_45071_19 20858 22585 + PL33_2
CAZyme k141_45071 k141_45071_20 22618 25710 + GH2
pfam k141_45071 k141_45071_21 25775 26128 + Glyoxalase
pfam k141_45071 k141_45071_22 26272 26886 + Hexapep | Mac | Hexapep_2
TC k141_45071 k141_45071_23 26952 27335 + 1.E.14.1.1
TC k141_45071 k141_45071_24 27332 28024 + 2.A.122.1.4
TC k141_45071 k141_45071_25 28040 28621 + 2.A.115.2.14
TF k141_45071 k141_45071_26 28618 29316 + GntR
NULL(UNKNOWN) k141_45071 k141_45071_27 29388 29879 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_45071 k141_45071_28 29935 30999 - 9.A.23.1.1
CAZyme k141_45071 k141_45071_29 31399 33249 + GH20
Gene ID: k141_45071_8
Type: TC
Location: 6290 - 7336 (+)
Gene ID: k141_45071_9
Type: CAZyme
Location: 7370 - 8839 (+)
Gene ID: k141_45071_10
Type: peptidase
Location: 8914 - 10143 (-)
Gene ID: k141_45071_11
Type: TF
Location: 10163 - 11785 (-)
Gene ID: k141_45071_12
Type: TC
Location: 11782 - 13593 (-)
Gene ID: k141_45071_13
Type: STP
Location: 13893 - 15275 (+)
Gene ID: k141_45071_14
Type: TC
Location: 15405 - 16331 (+)
Gene ID: k141_45071_15
Type: TC
Location: 16353 - 17198 (+)
Gene ID: k141_45071_16
Type: pfam
Location: 17224 - 17835 (+)
Gene ID: k141_45071_17
Type: CAZyme
Location: 17965 - 19671 (+)
Gene ID: k141_45071_18
Type: CAZyme
Location: 19684 - 20844 (+)
Gene ID: k141_45071_19
Type: CAZyme
Location: 20858 - 22585 (+)
Gene ID: k141_45071_20
Type: CAZyme
Location: 22618 - 25710 (+)
Gene ID: k141_45071_21
Type: pfam
Location: 25775 - 26128 (+)
Gene ID: k141_45071_22
Type: pfam
Location: 26272 - 26886 (+)
Gene ID: k141_45071_23
Type: TC
Location: 26952 - 27335 (+)
Gene ID: k141_45071_24
Type: TC
Location: 27332 - 28024 (+)
Gene ID: k141_45071_25
Type: TC
Location: 28040 - 28621 (+)
Gene ID: k141_45071_26
Type: TF
Location: 28618 - 29316 (+)
Gene ID: k141_45071_27
Type:
Location: 29388 - 29879 (+)
Gene ID: k141_45071_28
Type: TC
Location: 29935 - 30999 (-)
Gene ID: k141_45071_29
Type: CAZyme
Location: 31399 - 33249 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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