Cluster: CGMR007721_CGC13
🧬 Cluster Details
- Gene Count: 26
- CAZyme Count: 7
- Substrate:
- Genome ID: CGMR007721
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1682 | k141_1682_23 | 27429 | 28028 | + | 2.A.124.1.3 |
| pfam | k141_1682 | k141_1682_24 | 28096 | 29511 | - | RVT_1 | GIIM |
| STP | k141_1682 | k141_1682_25 | 29971 | 31629 | - | SBP_bac_1 |
| TC | k141_1682 | k141_1682_26 | 31699 | 32595 | - | 3.A.1.1.29 |
| TC | k141_1682 | k141_1682_27 | 32607 | 33545 | - | 3.A.1.1.10 |
| CAZyme | k141_1682 | k141_1682_28 | 33701 | 35728 | - | GH42 |
| TF | k141_1682 | k141_1682_29 | 35906 | 36676 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_1682 | k141_1682_30 | 36794 | 38944 | - | GH112 |
| CAZyme | k141_1682 | k141_1682_31 | 39040 | 40788 | - | CE12 |
| CAZyme | k141_1682 | k141_1682_32 | 40757 | 41806 | - | GH105 |
| STP | k141_1682 | k141_1682_33 | 41892 | 43565 | - | SBP_bac_1 |
| TC | k141_1682 | k141_1682_34 | 43636 | 44532 | - | 3.A.1.1.29 |
| TC | k141_1682 | k141_1682_35 | 44544 | 45482 | - | 3.A.1.1.10 |
| TF | k141_1682 | k141_1682_36 | 45820 | 46809 | + | HTH_AraC | HTH_AraC |
| CAZyme | k141_1682 | k141_1682_37 | 46830 | 49031 | - | GH35 |
| CAZyme | k141_1682 | k141_1682_38 | 49046 | 50683 | - | GH123 |
| CAZyme | k141_1682 | k141_1682_39 | 50765 | 52774 | - | GH115 |
| NULL(UNKNOWN) | k141_1682 | k141_1682_40 | 53266 | 53379 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_1682 | k141_1682_41 | 53499 | 55283 | + | 3.A.1.106.8 |
| TC | k141_1682 | k141_1682_42 | 55280 | 57115 | + | 3.A.1.106.3 |
| TC | k141_1682 | k141_1682_43 | 57170 | 58270 | - | 9.B.10.1.1 |
| TC | k141_1682 | k141_1682_44 | 58482 | 59255 | - | 3.A.1.34.1 |
| TC | k141_1682 | k141_1682_45 | 59248 | 60129 | - | 3.A.1.34.1 |
| pfam | k141_1682 | k141_1682_46 | 60148 | 61164 | - | ABC_sub_bind | Peripla_BP_6 |
| TF | k141_1682 | k141_1682_47 | 61712 | 62098 | + | GntR |
| TC | k141_1682 | k141_1682_48 | 62088 | 62993 | + | 3.A.1.132.6 |
Gene ID: k141_1682_23
Type: TC
Location: 27429 - 28028 (+)
Type: TC
Location: 27429 - 28028 (+)
Gene ID: k141_1682_24
Type: pfam
Location: 28096 - 29511 (-)
Type: pfam
Location: 28096 - 29511 (-)
Gene ID: k141_1682_25
Type: STP
Location: 29971 - 31629 (-)
Type: STP
Location: 29971 - 31629 (-)
Gene ID: k141_1682_26
Type: TC
Location: 31699 - 32595 (-)
Type: TC
Location: 31699 - 32595 (-)
Gene ID: k141_1682_27
Type: TC
Location: 32607 - 33545 (-)
Type: TC
Location: 32607 - 33545 (-)
Gene ID: k141_1682_28
Type: CAZyme
Location: 33701 - 35728 (-)
Type: CAZyme
Location: 33701 - 35728 (-)
Gene ID: k141_1682_29
Type: TF
Location: 35906 - 36676 (+)
Type: TF
Location: 35906 - 36676 (+)
Gene ID: k141_1682_30
Type: CAZyme
Location: 36794 - 38944 (-)
Type: CAZyme
Location: 36794 - 38944 (-)
Gene ID: k141_1682_31
Type: CAZyme
Location: 39040 - 40788 (-)
Type: CAZyme
Location: 39040 - 40788 (-)
Gene ID: k141_1682_32
Type: CAZyme
Location: 40757 - 41806 (-)
Type: CAZyme
Location: 40757 - 41806 (-)
Gene ID: k141_1682_33
Type: STP
Location: 41892 - 43565 (-)
Type: STP
Location: 41892 - 43565 (-)
Gene ID: k141_1682_34
Type: TC
Location: 43636 - 44532 (-)
Type: TC
Location: 43636 - 44532 (-)
Gene ID: k141_1682_35
Type: TC
Location: 44544 - 45482 (-)
Type: TC
Location: 44544 - 45482 (-)
Gene ID: k141_1682_36
Type: TF
Location: 45820 - 46809 (+)
Type: TF
Location: 45820 - 46809 (+)
Gene ID: k141_1682_37
Type: CAZyme
Location: 46830 - 49031 (-)
Type: CAZyme
Location: 46830 - 49031 (-)
Gene ID: k141_1682_38
Type: CAZyme
Location: 49046 - 50683 (-)
Type: CAZyme
Location: 49046 - 50683 (-)
Gene ID: k141_1682_39
Type: CAZyme
Location: 50765 - 52774 (-)
Type: CAZyme
Location: 50765 - 52774 (-)
Gene ID: k141_1682_40
Type:
Location: 53266 - 53379 (+)
Type:
Location: 53266 - 53379 (+)
Gene ID: k141_1682_41
Type: TC
Location: 53499 - 55283 (+)
Type: TC
Location: 53499 - 55283 (+)
Gene ID: k141_1682_42
Type: TC
Location: 55280 - 57115 (+)
Type: TC
Location: 55280 - 57115 (+)
Gene ID: k141_1682_43
Type: TC
Location: 57170 - 58270 (-)
Type: TC
Location: 57170 - 58270 (-)
Gene ID: k141_1682_44
Type: TC
Location: 58482 - 59255 (-)
Type: TC
Location: 58482 - 59255 (-)
Gene ID: k141_1682_45
Type: TC
Location: 59248 - 60129 (-)
Type: TC
Location: 59248 - 60129 (-)
Gene ID: k141_1682_46
Type: pfam
Location: 60148 - 61164 (-)
Type: pfam
Location: 60148 - 61164 (-)
Gene ID: k141_1682_47
Type: TF
Location: 61712 - 62098 (+)
Type: TF
Location: 61712 - 62098 (+)
Gene ID: k141_1682_48
Type: TC
Location: 62088 - 62993 (+)
Type: TC
Location: 62088 - 62993 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Egerieimonas_A
Species
Egerieimonas_A faecigallinarum
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.