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Cluster: CGMR007721_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_14498 k141_14498_39 40697 42511 - GH2
TC k141_14498 k141_14498_40 42579 43970 - 2.A.2.3.1
CAZyme k141_14498 k141_14498_41 44031 45740 - GH3
pfam k141_14498 k141_14498_42 45760 46599 - Hydrolase | HAD_2
TF k141_14498 k141_14498_43 46771 48006 + HTH_AraC | HTH_AraC
TC k141_14498 k141_14498_44 48037 48717 - 3.A.2.2.2
TC k141_14498 k141_14498_45 48736 50109 - 3.A.2.2.2
TC k141_14498 k141_14498_46 50109 51884 - 3.A.2.2.2
Gene ID: k141_14498_39
Type: CAZyme
Location: 40697 - 42511 (-)
Gene ID: k141_14498_40
Type: TC
Location: 42579 - 43970 (-)
Gene ID: k141_14498_41
Type: CAZyme
Location: 44031 - 45740 (-)
Gene ID: k141_14498_42
Type: pfam
Location: 45760 - 46599 (-)
Gene ID: k141_14498_43
Type: TF
Location: 46771 - 48006 (+)
Gene ID: k141_14498_44
Type: TC
Location: 48037 - 48717 (-)
Gene ID: k141_14498_45
Type: TC
Location: 48736 - 50109 (-)
Gene ID: k141_14498_46
Type: TC
Location: 50109 - 51884 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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