Cluster: CGMR006984_CGC23
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR006984
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_97294 | k141_97294_78 | 82444 | 83370 | - | CE7 |
| TC | k141_97294 | k141_97294_79 | 83502 | 84329 | - | 3.A.1.5.27 |
| TC | k141_97294 | k141_97294_80 | 84330 | 86345 | - | 3.A.1.5.25 |
| TC | k141_97294 | k141_97294_81 | 86349 | 87305 | - | 3.A.1.5.38 |
| TC | k141_97294 | k141_97294_82 | 87463 | 89076 | - | 3.A.1.5.27 |
| pfam | k141_97294 | k141_97294_83 | 89442 | 91382 | - | GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH |
| TC | k141_97294 | k141_97294_84 | 91389 | 93071 | - | 2.A.66.4.4 |
Gene ID: k141_97294_78
Type: CAZyme
Location: 82444 - 83370 (-)
Type: CAZyme
Location: 82444 - 83370 (-)
Gene ID: k141_97294_79
Type: TC
Location: 83502 - 84329 (-)
Type: TC
Location: 83502 - 84329 (-)
Gene ID: k141_97294_80
Type: TC
Location: 84330 - 86345 (-)
Type: TC
Location: 84330 - 86345 (-)
Gene ID: k141_97294_81
Type: TC
Location: 86349 - 87305 (-)
Type: TC
Location: 86349 - 87305 (-)
Gene ID: k141_97294_82
Type: TC
Location: 87463 - 89076 (-)
Type: TC
Location: 87463 - 89076 (-)
Gene ID: k141_97294_83
Type: pfam
Location: 89442 - 91382 (-)
Type: pfam
Location: 89442 - 91382 (-)
Gene ID: k141_97294_84
Type: TC
Location: 91389 - 93071 (-)
Type: TC
Location: 91389 - 93071 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp958445895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.