Cluster: CGMR006984_CGC17
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR006984
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_88152 | k141_88152_44 | 52076 | 54415 | - | 3.A.3.5.15 |
| TC | k141_88152 | k141_88152_45 | 54976 | 57234 | + | 1.I.1.1.3 |
| STP | k141_88152 | k141_88152_46 | 57855 | 58616 | + | Fer4 |
| TC | k141_88152 | k141_88152_47 | 58960 | 59472 | + | 4.A.1.2.5 |
| pfam | k141_88152 | k141_88152_48 | 59479 | 60345 | + | PRD | PRD | CAT_RBD |
| TC | k141_88152 | k141_88152_49 | 60445 | 62061 | + | 4.A.1.1.3 |
| CAZyme | k141_88152 | k141_88152_50 | 62065 | 63447 | + | GH4 |
Gene ID: k141_88152_44
Type: TC
Location: 52076 - 54415 (-)
Type: TC
Location: 52076 - 54415 (-)
Gene ID: k141_88152_45
Type: TC
Location: 54976 - 57234 (+)
Type: TC
Location: 54976 - 57234 (+)
Gene ID: k141_88152_46
Type: STP
Location: 57855 - 58616 (+)
Type: STP
Location: 57855 - 58616 (+)
Gene ID: k141_88152_47
Type: TC
Location: 58960 - 59472 (+)
Type: TC
Location: 58960 - 59472 (+)
Gene ID: k141_88152_48
Type: pfam
Location: 59479 - 60345 (+)
Type: pfam
Location: 59479 - 60345 (+)
Gene ID: k141_88152_49
Type: TC
Location: 60445 - 62061 (+)
Type: TC
Location: 60445 - 62061 (+)
Gene ID: k141_88152_50
Type: CAZyme
Location: 62065 - 63447 (+)
Type: CAZyme
Location: 62065 - 63447 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp958445895
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.