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Cluster: CGMR006984_CGC12

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_38616 k141_38616_64 69731 70900 - CE9
STP k141_38616 k141_38616_65 71018 72184 - SIS | SIS
TF k141_38616 k141_38616_66 72299 73030 - GntR
TC k141_38616 k141_38616_67 73216 74298 - 4.A.6.1.4
TC k141_38616 k141_38616_68 74288 75088 - 4.A.6.1.4
TC k141_38616 k141_38616_69 75179 75661 - 4.A.6.1.4
pfam k141_38616 k141_38616_70 75698 75979 - YajC
TC k141_38616 k141_38616_71 75979 76422 - 4.A.6.1.16
Gene ID: k141_38616_64
Type: CAZyme
Location: 69731 - 70900 (-)
Gene ID: k141_38616_65
Type: STP
Location: 71018 - 72184 (-)
Gene ID: k141_38616_66
Type: TF
Location: 72299 - 73030 (-)
Gene ID: k141_38616_67
Type: TC
Location: 73216 - 74298 (-)
Gene ID: k141_38616_68
Type: TC
Location: 74288 - 75088 (-)
Gene ID: k141_38616_69
Type: TC
Location: 75179 - 75661 (-)
Gene ID: k141_38616_70
Type: pfam
Location: 75698 - 75979 (-)
Gene ID: k141_38616_71
Type: TC
Location: 75979 - 76422 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_38616_70 vegan > omnivore 1.06491 0.00566

🧭 Explore Read Mapping of CGC

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