dbCAN Logo

Cluster: CGMR006747_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_161489 k141_161489_224 235223 236506 - GH18
NULL(UNKNOWN) k141_161489 k141_161489_225 236654 236905 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_161489 k141_161489_226 236955 238568 - 4.C.1.1.4
NULL(UNKNOWN) k141_161489 k141_161489_227 238565 239020 - NULL(UNKNOWN)
[View Structural Homologs]
TC k141_161489 k141_161489_228 239211 240239 + 9.A.11.1.1
Gene ID: k141_161489_224
Type: CAZyme
Location: 235223 - 236506 (-)
Gene ID: k141_161489_225
Type:
Location: 236654 - 236905 (+)
Gene ID: k141_161489_226
Type: TC
Location: 236955 - 238568 (-)
Gene ID: k141_161489_227
Type:
Location: 238565 - 239020 (-)
Gene ID: k141_161489_228
Type: TC
Location: 239211 - 240239 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_161489_226 vegan > omnivore 1.42382 0.02973
k141_161489_226 vegetarian > omnivore 2.24746 0.00224
k141_161489_227 vegan > omnivore 1.38233 0.02973
k141_161489_227 vegetarian > omnivore 1.78253 0.00224

🧭 Explore Read Mapping of CGC

← Back to Cluster List