Cluster: CGMR006747_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR006747
- CGC Family ID: CGCFAM_00196
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_306337 | k141_306337_20 | 20306 | 22234 | - | 3.A.1.135.5 |
| TC | k141_306337 | k141_306337_21 | 22234 | 23982 | - | 3.A.1.135.5 |
| TF | k141_306337 | k141_306337_22 | 23945 | 24445 | - | MarR |
| CAZyme | k141_306337 | k141_306337_23 | 24717 | 26123 | + | CE4 |
Gene ID: k141_306337_20
Type: TC
Location: 20306 - 22234 (-)
Type: TC
Location: 20306 - 22234 (-)
Gene ID: k141_306337_21
Type: TC
Location: 22234 - 23982 (-)
Type: TC
Location: 22234 - 23982 (-)
Gene ID: k141_306337_22
Type: TF
Location: 23945 - 24445 (-)
Type: TF
Location: 23945 - 24445 (-)
Gene ID: k141_306337_23
Type: CAZyme
Location: 24717 - 26123 (+)
Type: CAZyme
Location: 24717 - 26123 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
Evtepia
Species
Evtepia gabavorous
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_306337_22 | vegan > omnivore | 2.37866 | 0.02973 |
| k141_306337_22 | vegetarian > omnivore | 3.43648 | 0.00224 |
| k141_306337_22 | vegetarian > vegan | 1.05782 | 0.01560 |
| k141_306337_23 | vegan > omnivore | 1.79117 | 0.02973 |
| k141_306337_23 | vegetarian > omnivore | 3.52957 | 0.00224 |
| k141_306337_23 | vegetarian > vegan | 1.73841 | 0.01560 |