Cluster: CGMR006697_CGC8
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR006697
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_16800 | k141_16800_72 | 87288 | 96545 | - | GH94 | GT84 |
| peptidase | k141_16800 | k141_16800_73 | 97120 | 98442 | - | M18.UPW |
| pfam | k141_16800 | k141_16800_74 | 98818 | 99846 | + | ROK |
| TC | k141_16800 | k141_16800_75 | 99921 | 101090 | + | 2.A.1.7.6 |
| pfam | k141_16800 | k141_16800_76 | 101095 | 101982 | + | PHP |
| pfam | k141_16800 | k141_16800_77 | 102248 | 103132 | - | DHDPS |
| TC | k141_16800 | k141_16800_78 | 103836 | 105011 | + | 2.A.4.7.6 |
| peptidase | k141_16800 | k141_16800_79 | 105896 | 108064 | - | M13.UPW |
| NULL(UNKNOWN) | k141_16800 | k141_16800_80 | 108360 | 108677 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_16800 | k141_16800_81 | 108877 | 109599 | - | 3.A.1.3.25 |
| TC | k141_16800 | k141_16800_82 | 109586 | 110245 | - | 3.A.1.3.15 |
| TC | k141_16800 | k141_16800_83 | 110316 | 111176 | - | 3.A.1.3.27 |
| pfam | k141_16800 | k141_16800_84 | 111537 | 112334 | - | AP_endonuc_2 |
| TC | k141_16800 | k141_16800_85 | 112337 | 113425 | - | 3.A.1.1.32 |
| TC | k141_16800 | k141_16800_86 | 113435 | 114262 | - | 3.A.1.1.20 |
| pfam | k141_16800 | k141_16800_87 | 114252 | 115160 | - | BPD_transp_1 |
| TC | k141_16800 | k141_16800_88 | 115404 | 116714 | - | 3.A.1.1.44 |
Gene ID: k141_16800_72
Type: CAZyme
Location: 87288 - 96545 (-)
Type: CAZyme
Location: 87288 - 96545 (-)
Gene ID: k141_16800_73
Type: peptidase
Location: 97120 - 98442 (-)
Type: peptidase
Location: 97120 - 98442 (-)
Gene ID: k141_16800_74
Type: pfam
Location: 98818 - 99846 (+)
Type: pfam
Location: 98818 - 99846 (+)
Gene ID: k141_16800_75
Type: TC
Location: 99921 - 101090 (+)
Type: TC
Location: 99921 - 101090 (+)
Gene ID: k141_16800_76
Type: pfam
Location: 101095 - 101982 (+)
Type: pfam
Location: 101095 - 101982 (+)
Gene ID: k141_16800_77
Type: pfam
Location: 102248 - 103132 (-)
Type: pfam
Location: 102248 - 103132 (-)
Gene ID: k141_16800_78
Type: TC
Location: 103836 - 105011 (+)
Type: TC
Location: 103836 - 105011 (+)
Gene ID: k141_16800_79
Type: peptidase
Location: 105896 - 108064 (-)
Type: peptidase
Location: 105896 - 108064 (-)
Gene ID: k141_16800_80
Type:
Location: 108360 - 108677 (-)
Type:
Location: 108360 - 108677 (-)
Gene ID: k141_16800_81
Type: TC
Location: 108877 - 109599 (-)
Type: TC
Location: 108877 - 109599 (-)
Gene ID: k141_16800_82
Type: TC
Location: 109586 - 110245 (-)
Type: TC
Location: 109586 - 110245 (-)
Gene ID: k141_16800_83
Type: TC
Location: 110316 - 111176 (-)
Type: TC
Location: 110316 - 111176 (-)
Gene ID: k141_16800_84
Type: pfam
Location: 111537 - 112334 (-)
Type: pfam
Location: 111537 - 112334 (-)
Gene ID: k141_16800_85
Type: TC
Location: 112337 - 113425 (-)
Type: TC
Location: 112337 - 113425 (-)
Gene ID: k141_16800_86
Type: TC
Location: 113435 - 114262 (-)
Type: TC
Location: 113435 - 114262 (-)
Gene ID: k141_16800_87
Type: pfam
Location: 114252 - 115160 (-)
Type: pfam
Location: 114252 - 115160 (-)
Gene ID: k141_16800_88
Type: TC
Location: 115404 - 116714 (-)
Type: TC
Location: 115404 - 116714 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium neonatale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.