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Cluster: CGMR006697_CGC77

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_846 k141_846_228 237492 238391 + 3.A.1.1.28
TC k141_846 k141_846_229 238397 239239 + 3.A.1.1.18
TC k141_846 k141_846_230 239300 241069 + 8.A.59.2.1
TF k141_846 k141_846_231 241069 242631 + HTH_AraC | HTH_AraC
CAZyme k141_846 k141_846_232 242628 243953 + GH30_2
CAZyme k141_846 k141_846_233 243981 246110 + GH3
TC k141_846 k141_846_234 246679 248088 + 2.A.66.1.33
TF k141_846 k141_846_235 248415 249323 + HTH_1
pfam k141_846 k141_846_236 249511 250623 + Meth_synt_2 | Meth_synt_2
TC k141_846 k141_846_237 251059 252441 + 2.A.3.1.16
TC k141_846 k141_846_238 252706 254502 - 5.A.1.6.1
Gene ID: k141_846_228
Type: TC
Location: 237492 - 238391 (+)
Gene ID: k141_846_229
Type: TC
Location: 238397 - 239239 (+)
Gene ID: k141_846_230
Type: TC
Location: 239300 - 241069 (+)
Gene ID: k141_846_231
Type: TF
Location: 241069 - 242631 (+)
Gene ID: k141_846_232
Type: CAZyme
Location: 242628 - 243953 (+)
Gene ID: k141_846_233
Type: CAZyme
Location: 243981 - 246110 (+)
Gene ID: k141_846_234
Type: TC
Location: 246679 - 248088 (+)
Gene ID: k141_846_235
Type: TF
Location: 248415 - 249323 (+)
Gene ID: k141_846_236
Type: pfam
Location: 249511 - 250623 (+)
Gene ID: k141_846_237
Type: TC
Location: 251059 - 252441 (+)
Gene ID: k141_846_238
Type: TC
Location: 252706 - 254502 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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