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Cluster: CGMR006697_CGC71

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_14218 k141_14218_4 3773 6202 + 3.A.3.6.10
TC k141_14218 k141_14218_5 6452 7483 + 8.A.21.2.4
pfam k141_14218 k141_14218_6 7467 8072 + RDD
CAZyme k141_14218 k141_14218_7 8308 10566 + GT35
pfam k141_14218 k141_14218_8 11012 12910 + MutS_V
CAZyme k141_14218 k141_14218_9 13091 16063 + CBM41 | GH13_14
TF k141_14218 k141_14218_10 16129 16800 - HTH_AraC | HTH_AraC
CAZyme k141_14218 k141_14218_11 17019 18734 + CBM34 | GH13_20
pfam k141_14218 k141_14218_12 18809 19423 - HutD
TC k141_14218 k141_14218_13 19757 20518 + 1.A.16.3.3
Gene ID: k141_14218_4
Type: TC
Location: 3773 - 6202 (+)
Gene ID: k141_14218_5
Type: TC
Location: 6452 - 7483 (+)
Gene ID: k141_14218_6
Type: pfam
Location: 7467 - 8072 (+)
Gene ID: k141_14218_7
Type: CAZyme
Location: 8308 - 10566 (+)
Gene ID: k141_14218_8
Type: pfam
Location: 11012 - 12910 (+)
Gene ID: k141_14218_9
Type: CAZyme
Location: 13091 - 16063 (+)
Gene ID: k141_14218_10
Type: TF
Location: 16129 - 16800 (-)
Gene ID: k141_14218_11
Type: CAZyme
Location: 17019 - 18734 (+)
Gene ID: k141_14218_12
Type: pfam
Location: 18809 - 19423 (-)
Gene ID: k141_14218_13
Type: TC
Location: 19757 - 20518 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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