Cluster: CGMR006697_CGC69
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR006697
- CGC Family ID: CGCFAM_01879
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_2032 | k141_2032_41 | 48163 | 49455 | + | 2.A.40.1.1 |
| TF | k141_2032 | k141_2032_42 | 49742 | 50785 | - | HTH_AraC | HTH_AraC |
| TC | k141_2032 | k141_2032_43 | 50921 | 52270 | + | 2.A.2.3.3 |
| NULL(UNKNOWN) | k141_2032 | k141_2032_44 | 52292 | 52522 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | k141_2032 | k141_2032_45 | 52539 | 53816 | + | Sugar_tr | MFS_1 |
| CAZyme | k141_2032 | k141_2032_46 | 53825 | 55408 | + | GH78 |
Gene ID: k141_2032_41
Type: TC
Location: 48163 - 49455 (+)
Type: TC
Location: 48163 - 49455 (+)
Gene ID: k141_2032_42
Type: TF
Location: 49742 - 50785 (-)
Type: TF
Location: 49742 - 50785 (-)
Gene ID: k141_2032_43
Type: TC
Location: 50921 - 52270 (+)
Type: TC
Location: 50921 - 52270 (+)
Gene ID: k141_2032_44
Type:
Location: 52292 - 52522 (+)
Type:
Location: 52292 - 52522 (+)
Gene ID: k141_2032_45
Type: pfam
Location: 52539 - 53816 (+)
Type: pfam
Location: 52539 - 53816 (+)
Gene ID: k141_2032_46
Type: CAZyme
Location: 53825 - 55408 (+)
Type: CAZyme
Location: 53825 - 55408 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium neonatale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.