Cluster: CGMR006697_CGC63
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR006697
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_153 | k141_153_1 | 838 | 2937 | - | GH42 |
| TC | k141_153 | k141_153_2 | 2993 | 4708 | - | 1.B.52.2.2 |
| TC | k141_153 | k141_153_3 | 4830 | 5672 | - | 3.A.1.1.4 |
| TC | k141_153 | k141_153_4 | 5665 | 6549 | - | 3.A.1.1.4 |
| TC | k141_153 | k141_153_5 | 6813 | 8126 | - | 3.A.1.1.4 |
| TF | k141_153 | k141_153_6 | 8430 | 9440 | - | LacI |
| STP | k141_153 | k141_153_7 | 9695 | 10645 | - | Peripla_BP_2 |
| TC | k141_153 | k141_153_8 | 10779 | 11534 | - | 3.A.1.14.7 |
Gene ID: k141_153_1
Type: CAZyme
Location: 838 - 2937 (-)
Type: CAZyme
Location: 838 - 2937 (-)
Gene ID: k141_153_2
Type: TC
Location: 2993 - 4708 (-)
Type: TC
Location: 2993 - 4708 (-)
Gene ID: k141_153_3
Type: TC
Location: 4830 - 5672 (-)
Type: TC
Location: 4830 - 5672 (-)
Gene ID: k141_153_4
Type: TC
Location: 5665 - 6549 (-)
Type: TC
Location: 5665 - 6549 (-)
Gene ID: k141_153_5
Type: TC
Location: 6813 - 8126 (-)
Type: TC
Location: 6813 - 8126 (-)
Gene ID: k141_153_6
Type: TF
Location: 8430 - 9440 (-)
Type: TF
Location: 8430 - 9440 (-)
Gene ID: k141_153_7
Type: STP
Location: 9695 - 10645 (-)
Type: STP
Location: 9695 - 10645 (-)
Gene ID: k141_153_8
Type: TC
Location: 10779 - 11534 (-)
Type: TC
Location: 10779 - 11534 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium neonatale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.