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Cluster: CGMR006697_CGC54

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_12659 k141_12659_58 67440 68348 + 2.A.7.3.31
TF k141_12659 k141_12659_59 68546 70084 + HTH_AraC | HTH_AraC
TC k141_12659 k141_12659_60 70068 71768 + 8.A.59.2.1
pfam k141_12659 k141_12659_61 71996 73273 + SBP_bac_1 | SBP_bac_8
TC k141_12659 k141_12659_62 73308 74741 + 3.A.1.1.27
TC k141_12659 k141_12659_63 74741 75586 + 3.A.1.1.27
TC k141_12659 k141_12659_64 75746 77446 + 3.A.1.1.9
CAZyme k141_12659 k141_12659_65 77465 79417 + GH133
CAZyme k141_12659 k141_12659_66 79419 81383 + GH13_14
TC k141_12659 k141_12659_67 81512 82186 + 9.B.143.2.3
Gene ID: k141_12659_58
Type: TC
Location: 67440 - 68348 (+)
Gene ID: k141_12659_59
Type: TF
Location: 68546 - 70084 (+)
Gene ID: k141_12659_60
Type: TC
Location: 70068 - 71768 (+)
Gene ID: k141_12659_61
Type: pfam
Location: 71996 - 73273 (+)
Gene ID: k141_12659_62
Type: TC
Location: 73308 - 74741 (+)
Gene ID: k141_12659_63
Type: TC
Location: 74741 - 75586 (+)
Gene ID: k141_12659_64
Type: TC
Location: 75746 - 77446 (+)
Gene ID: k141_12659_65
Type: CAZyme
Location: 77465 - 79417 (+)
Gene ID: k141_12659_66
Type: CAZyme
Location: 79419 - 81383 (+)
Gene ID: k141_12659_67
Type: TC
Location: 81512 - 82186 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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