Cluster: CGMR006697_CGC51
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR006697
- CGC Family ID: CGCFAM_00494
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_16301 | k141_16301_1 | 340 | 1323 | + | GT2 |
| pfam | k141_16301 | k141_16301_2 | 1500 | 2354 | + | LicD |
| CAZyme | k141_16301 | k141_16301_3 | 2622 | 3605 | + | GT2 |
| TC | k141_16301 | k141_16301_4 | 3681 | 5543 | + | 9.B.18.2.1 |
| pfam | k141_16301 | k141_16301_5 | 5546 | 7039 | + | Wzy_C |
| CAZyme | k141_16301 | k141_16301_6 | 7263 | 9017 | + | GH3 |
Gene ID: k141_16301_1
Type: CAZyme
Location: 340 - 1323 (+)
Type: CAZyme
Location: 340 - 1323 (+)
Gene ID: k141_16301_2
Type: pfam
Location: 1500 - 2354 (+)
Type: pfam
Location: 1500 - 2354 (+)
Gene ID: k141_16301_3
Type: CAZyme
Location: 2622 - 3605 (+)
Type: CAZyme
Location: 2622 - 3605 (+)
Gene ID: k141_16301_4
Type: TC
Location: 3681 - 5543 (+)
Type: TC
Location: 3681 - 5543 (+)
Gene ID: k141_16301_5
Type: pfam
Location: 5546 - 7039 (+)
Type: pfam
Location: 5546 - 7039 (+)
Gene ID: k141_16301_6
Type: CAZyme
Location: 7263 - 9017 (+)
Type: CAZyme
Location: 7263 - 9017 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium neonatale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.