Cluster: CGMR006697_CGC46
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR006697
- CGC Family ID: CGCFAM_00191
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_14963 | k141_14963_15 | 16835 | 17266 | - | 4.A.6.1.16 |
| STP | k141_14963 | k141_14963_16 | 17285 | 18445 | - | SIS | SIS |
| TF | k141_14963 | k141_14963_17 | 18561 | 19307 | - | GntR |
| TC | k141_14963 | k141_14963_18 | 19440 | 20288 | - | 4.A.6.1.4 |
| TC | k141_14963 | k141_14963_19 | 20275 | 21045 | - | 4.A.6.1.4 |
| TC | k141_14963 | k141_14963_20 | 21075 | 21551 | - | 4.A.6.1.4 |
| CAZyme | k141_14963 | k141_14963_21 | 21866 | 23005 | + | CE9 |
Gene ID: k141_14963_15
Type: TC
Location: 16835 - 17266 (-)
Type: TC
Location: 16835 - 17266 (-)
Gene ID: k141_14963_16
Type: STP
Location: 17285 - 18445 (-)
Type: STP
Location: 17285 - 18445 (-)
Gene ID: k141_14963_17
Type: TF
Location: 18561 - 19307 (-)
Type: TF
Location: 18561 - 19307 (-)
Gene ID: k141_14963_18
Type: TC
Location: 19440 - 20288 (-)
Type: TC
Location: 19440 - 20288 (-)
Gene ID: k141_14963_19
Type: TC
Location: 20275 - 21045 (-)
Type: TC
Location: 20275 - 21045 (-)
Gene ID: k141_14963_20
Type: TC
Location: 21075 - 21551 (-)
Type: TC
Location: 21075 - 21551 (-)
Gene ID: k141_14963_21
Type: CAZyme
Location: 21866 - 23005 (+)
Type: CAZyme
Location: 21866 - 23005 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium neonatale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.