Cluster: CGMR006697_CGC44
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR006697
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_1547 | k141_1547_65 | 72353 | 74542 | - | GH36 |
| peptidase | k141_1547 | k141_1547_66 | 74907 | 75722 | - | S33.UPW |
| pfam | k141_1547 | k141_1547_67 | 75851 | 76663 | - | ADI |
| TC | k141_1547 | k141_1547_68 | 77032 | 78144 | + | 3.A.18.1.1 |
| NULL(UNKNOWN) | k141_1547 | k141_1547_69 | 78267 | 78935 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | k141_1547 | k141_1547_70 | 79051 | 80646 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_1547 | k141_1547_71 | 80651 | 81433 | - | 3.A.1.128.6 |
| pfam | k141_1547 | k141_1547_72 | 81663 | 83096 | - | PLDc | PLDc | PLDc_2 | PLDc_2 | PLDc_N |
| pfam | k141_1547 | k141_1547_73 | 83205 | 84380 | - | UPF0020 | TRM | TRM5-TYW2_MTfase | Cons_hypoth95 | PrmA | Methyltrans_SAM | Methyltransf_31 | PUA_3 |
| TC | k141_1547 | k141_1547_74 | 85162 | 86034 | - | 2.A.4.7.9 |
| TC | k141_1547 | k141_1547_75 | 86413 | 87855 | - | 3.A.18.1.1 |
Gene ID: k141_1547_65
Type: CAZyme
Location: 72353 - 74542 (-)
Type: CAZyme
Location: 72353 - 74542 (-)
Gene ID: k141_1547_66
Type: peptidase
Location: 74907 - 75722 (-)
Type: peptidase
Location: 74907 - 75722 (-)
Gene ID: k141_1547_67
Type: pfam
Location: 75851 - 76663 (-)
Type: pfam
Location: 75851 - 76663 (-)
Gene ID: k141_1547_68
Type: TC
Location: 77032 - 78144 (+)
Type: TC
Location: 77032 - 78144 (+)
Gene ID: k141_1547_69
Type:
Location: 78267 - 78935 (-)
Type:
Location: 78267 - 78935 (-)
Gene ID: k141_1547_70
Type:
Location: 79051 - 80646 (-)
Type:
Location: 79051 - 80646 (-)
Gene ID: k141_1547_71
Type: TC
Location: 80651 - 81433 (-)
Type: TC
Location: 80651 - 81433 (-)
Gene ID: k141_1547_72
Type: pfam
Location: 81663 - 83096 (-)
Type: pfam
Location: 81663 - 83096 (-)
Gene ID: k141_1547_73
Type: pfam
Location: 83205 - 84380 (-)
Type: pfam
Location: 83205 - 84380 (-)
Gene ID: k141_1547_74
Type: TC
Location: 85162 - 86034 (-)
Type: TC
Location: 85162 - 86034 (-)
Gene ID: k141_1547_75
Type: TC
Location: 86413 - 87855 (-)
Type: TC
Location: 86413 - 87855 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium neonatale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.