Cluster: CGMR006697_CGC38
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR006697
- CGC Family ID: CGCFAM_01670
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_821 | k141_821_6 | 5009 | 7318 | + | GH146 |
| TF | k141_821 | k141_821_7 | 7610 | 9220 | + | HTH_AraC |
| TC | k141_821 | k141_821_8 | 9217 | 11058 | + | 8.A.59.2.1 |
| TC | k141_821 | k141_821_9 | 11137 | 12510 | + | 3.A.1.1.28 |
| TC | k141_821 | k141_821_10 | 12570 | 13526 | + | 3.A.1.1.11 |
| TC | k141_821 | k141_821_11 | 13526 | 14359 | + | 3.A.1.1.11 |
| TC | k141_821 | k141_821_12 | 14759 | 16147 | + | 2.A.45.3.1 |
Gene ID: k141_821_6
Type: CAZyme
Location: 5009 - 7318 (+)
Type: CAZyme
Location: 5009 - 7318 (+)
Gene ID: k141_821_7
Type: TF
Location: 7610 - 9220 (+)
Type: TF
Location: 7610 - 9220 (+)
Gene ID: k141_821_8
Type: TC
Location: 9217 - 11058 (+)
Type: TC
Location: 9217 - 11058 (+)
Gene ID: k141_821_9
Type: TC
Location: 11137 - 12510 (+)
Type: TC
Location: 11137 - 12510 (+)
Gene ID: k141_821_10
Type: TC
Location: 12570 - 13526 (+)
Type: TC
Location: 12570 - 13526 (+)
Gene ID: k141_821_11
Type: TC
Location: 13526 - 14359 (+)
Type: TC
Location: 13526 - 14359 (+)
Gene ID: k141_821_12
Type: TC
Location: 14759 - 16147 (+)
Type: TC
Location: 14759 - 16147 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium neonatale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.