dbCAN Logo

Cluster: CGMR006697_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_10989 k141_10989_30 32618 34081 + GH43_4
TF k141_10989 k141_10989_31 34128 35060 - HTH_5
CAZyme k141_10989 k141_10989_32 35372 36847 + GH51_1
pfam k141_10989 k141_10989_33 36852 37106 + DUF6171
CAZyme k141_10989 k141_10989_34 37656 38633 + GH43_26
TC k141_10989 k141_10989_35 39252 40625 + 3.A.1.1.20
TC k141_10989 k141_10989_36 40732 41637 + 3.A.1.1.20
TC k141_10989 k141_10989_37 41659 42552 + 3.A.1.1.11
CAZyme k141_10989 k141_10989_38 42632 43957 + GH43_4
Gene ID: k141_10989_30
Type: CAZyme
Location: 32618 - 34081 (+)
Gene ID: k141_10989_31
Type: TF
Location: 34128 - 35060 (-)
Gene ID: k141_10989_32
Type: CAZyme
Location: 35372 - 36847 (+)
Gene ID: k141_10989_33
Type: pfam
Location: 36852 - 37106 (+)
Gene ID: k141_10989_34
Type: CAZyme
Location: 37656 - 38633 (+)
Gene ID: k141_10989_35
Type: TC
Location: 39252 - 40625 (+)
Gene ID: k141_10989_36
Type: TC
Location: 40732 - 41637 (+)
Gene ID: k141_10989_37
Type: TC
Location: 41659 - 42552 (+)
Gene ID: k141_10989_38
Type: CAZyme
Location: 42632 - 43957 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List