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Cluster: CGMR006697_CGC26

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_866 k141_866_43 53149 55356 - GH36
TC k141_866 k141_866_44 55393 56232 - 3.A.1.1.36
TC k141_866 k141_866_45 56250 57203 - 3.A.1.1.11
TC k141_866 k141_866_46 57283 58575 - 3.A.1.1.40
TF k141_866 k141_866_47 59034 59888 + HTH_AraC | HTH_AraC
TF k141_866 k141_866_48 60376 61134 - LytTR
TC k141_866 k141_866_49 61177 62391 - 9.B.33.1.1
TC k141_866 k141_866_50 62606 64402 + 2.A.114.1.5
TC k141_866 k141_866_51 64467 66047 - 3.A.1.12.8
TC k141_866 k141_866_52 66040 67185 - 3.A.1.12.4
pfam k141_866 k141_866_53 67660 69714 - SLH | DUF4901 | DUF4901
TC k141_866 k141_866_54 69923 71260 - 2.A.66.1.26
TC k141_866 k141_866_55 71425 73203 - 1.B.52.2.1
Gene ID: k141_866_43
Type: CAZyme
Location: 53149 - 55356 (-)
Gene ID: k141_866_44
Type: TC
Location: 55393 - 56232 (-)
Gene ID: k141_866_45
Type: TC
Location: 56250 - 57203 (-)
Gene ID: k141_866_46
Type: TC
Location: 57283 - 58575 (-)
Gene ID: k141_866_47
Type: TF
Location: 59034 - 59888 (+)
Gene ID: k141_866_48
Type: TF
Location: 60376 - 61134 (-)
Gene ID: k141_866_49
Type: TC
Location: 61177 - 62391 (-)
Gene ID: k141_866_50
Type: TC
Location: 62606 - 64402 (+)
Gene ID: k141_866_51
Type: TC
Location: 64467 - 66047 (-)
Gene ID: k141_866_52
Type: TC
Location: 66040 - 67185 (-)
Gene ID: k141_866_53
Type: pfam
Location: 67660 - 69714 (-)
Gene ID: k141_866_54
Type: TC
Location: 69923 - 71260 (-)
Gene ID: k141_866_55
Type: TC
Location: 71425 - 73203 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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