Cluster: CGMR006697_CGC19
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR006697
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_2120 | k141_2120_2 | 874 | 3903 | + | GH2 |
| TF | k141_2120 | k141_2120_3 | 3988 | 4815 | - | HTH_AraC | HTH_AraC |
| CAZyme | k141_2120 | k141_2120_4 | 4965 | 5855 | - | GH16_3 |
| CAZyme | k141_2120 | k141_2120_5 | 6475 | 7563 | + | GH170 |
| TF | k141_2120 | k141_2120_6 | 7584 | 9500 | + | HTH_11 | Mga |
| TC | k141_2120 | k141_2120_7 | 9527 | 10840 | + | 4.A.3.2.8 |
Gene ID: k141_2120_2
Type: CAZyme
Location: 874 - 3903 (+)
Type: CAZyme
Location: 874 - 3903 (+)
Gene ID: k141_2120_3
Type: TF
Location: 3988 - 4815 (-)
Type: TF
Location: 3988 - 4815 (-)
Gene ID: k141_2120_4
Type: CAZyme
Location: 4965 - 5855 (-)
Type: CAZyme
Location: 4965 - 5855 (-)
Gene ID: k141_2120_5
Type: CAZyme
Location: 6475 - 7563 (+)
Type: CAZyme
Location: 6475 - 7563 (+)
Gene ID: k141_2120_6
Type: TF
Location: 7584 - 9500 (+)
Type: TF
Location: 7584 - 9500 (+)
Gene ID: k141_2120_7
Type: TC
Location: 9527 - 10840 (+)
Type: TC
Location: 9527 - 10840 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium neonatale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.