Cluster: CGMR006697_CGC13
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR006697
- CGC Family ID: CGCFAM_02399
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_14972 | k141_14972_1 | 166 | 1020 | + | 3.A.1.24.6 |
| TC | k141_14972 | k141_14972_2 | 1167 | 2195 | + | 3.A.1.24.2 |
| TC | k141_14972 | k141_14972_3 | 2196 | 2858 | + | 3.A.1.24.5 |
| CAZyme | k141_14972 | k141_14972_4 | 2921 | 4288 | + | AA4 |
| pfam | k141_14972 | k141_14972_5 | 4528 | 4956 | - | GGACT |
| peptidase | k141_14972 | k141_14972_6 | 4956 | 5597 | - | C15.001 |
| TC | k141_14972 | k141_14972_7 | 5894 | 6823 | - | 9.B.211.1.2 |
Gene ID: k141_14972_1
Type: TC
Location: 166 - 1020 (+)
Type: TC
Location: 166 - 1020 (+)
Gene ID: k141_14972_2
Type: TC
Location: 1167 - 2195 (+)
Type: TC
Location: 1167 - 2195 (+)
Gene ID: k141_14972_3
Type: TC
Location: 2196 - 2858 (+)
Type: TC
Location: 2196 - 2858 (+)
Gene ID: k141_14972_4
Type: CAZyme
Location: 2921 - 4288 (+)
Type: CAZyme
Location: 2921 - 4288 (+)
Gene ID: k141_14972_5
Type: pfam
Location: 4528 - 4956 (-)
Type: pfam
Location: 4528 - 4956 (-)
Gene ID: k141_14972_6
Type: peptidase
Location: 4956 - 5597 (-)
Type: peptidase
Location: 4956 - 5597 (-)
Gene ID: k141_14972_7
Type: TC
Location: 5894 - 6823 (-)
Type: TC
Location: 5894 - 6823 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium neonatale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.