Cluster: CGMR006697_CGC12
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR006697
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_1331 | k141_1331_43 | 57678 | 59111 | - | 2.A.40.7.2 |
| pfam | k141_1331 | k141_1331_44 | 59508 | 60608 | + | PAD_porph |
| pfam | k141_1331 | k141_1331_45 | 60610 | 61515 | + | CN_hydrolase |
| TC | k141_1331 | k141_1331_46 | 61621 | 63411 | - | 1.B.52.2.2 |
| pfam | k141_1331 | k141_1331_47 | 63705 | 64868 | - | Flavodoxin_1 | Lactamase_B | Flavodoxin_5 | ODP |
| pfam | k141_1331 | k141_1331_48 | 65380 | 66993 | + | Arylsulfotrans | Arylsulfotran_2 | Arylsulfotran_N |
| TC | k141_1331 | k141_1331_49 | 67185 | 68141 | - | 2.A.85.5.1 |
| peptidase | k141_1331 | k141_1331_50 | 68413 | 69810 | - | S09.UPC |
| TC | k141_1331 | k141_1331_51 | 70099 | 71961 | - | 4.A.1.2.6 |
| pfam | k141_1331 | k141_1331_52 | 72273 | 73103 | - | PRD | PRD | CAT_RBD |
| CAZyme | k141_1331 | k141_1331_53 | 73579 | 75012 | - | GH1 |
| NULL(UNKNOWN) | k141_1331 | k141_1331_54 | 75252 | 75380 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | k141_1331 | k141_1331_55 | 75717 | 76130 | - | MerR |
| TC | k141_1331 | k141_1331_56 | 76241 | 77086 | + | 8.A.5.1.4 |
| pfam | k141_1331 | k141_1331_57 | 77259 | 77840 | + | His_Phos_1 |
| TC | k141_1331 | k141_1331_58 | 78137 | 80119 | - | 2.A.72.1.3 |
| TC | k141_1331 | k141_1331_59 | 80485 | 81471 | - | 8.A.5.1.6 |
Gene ID: k141_1331_43
Type: TC
Location: 57678 - 59111 (-)
Type: TC
Location: 57678 - 59111 (-)
Gene ID: k141_1331_44
Type: pfam
Location: 59508 - 60608 (+)
Type: pfam
Location: 59508 - 60608 (+)
Gene ID: k141_1331_45
Type: pfam
Location: 60610 - 61515 (+)
Type: pfam
Location: 60610 - 61515 (+)
Gene ID: k141_1331_46
Type: TC
Location: 61621 - 63411 (-)
Type: TC
Location: 61621 - 63411 (-)
Gene ID: k141_1331_47
Type: pfam
Location: 63705 - 64868 (-)
Type: pfam
Location: 63705 - 64868 (-)
Gene ID: k141_1331_48
Type: pfam
Location: 65380 - 66993 (+)
Type: pfam
Location: 65380 - 66993 (+)
Gene ID: k141_1331_49
Type: TC
Location: 67185 - 68141 (-)
Type: TC
Location: 67185 - 68141 (-)
Gene ID: k141_1331_50
Type: peptidase
Location: 68413 - 69810 (-)
Type: peptidase
Location: 68413 - 69810 (-)
Gene ID: k141_1331_51
Type: TC
Location: 70099 - 71961 (-)
Type: TC
Location: 70099 - 71961 (-)
Gene ID: k141_1331_52
Type: pfam
Location: 72273 - 73103 (-)
Type: pfam
Location: 72273 - 73103 (-)
Gene ID: k141_1331_53
Type: CAZyme
Location: 73579 - 75012 (-)
Type: CAZyme
Location: 73579 - 75012 (-)
Gene ID: k141_1331_54
Type:
Location: 75252 - 75380 (-)
Type:
Location: 75252 - 75380 (-)
Gene ID: k141_1331_55
Type: TF
Location: 75717 - 76130 (-)
Type: TF
Location: 75717 - 76130 (-)
Gene ID: k141_1331_56
Type: TC
Location: 76241 - 77086 (+)
Type: TC
Location: 76241 - 77086 (+)
Gene ID: k141_1331_57
Type: pfam
Location: 77259 - 77840 (+)
Type: pfam
Location: 77259 - 77840 (+)
Gene ID: k141_1331_58
Type: TC
Location: 78137 - 80119 (-)
Type: TC
Location: 78137 - 80119 (-)
Gene ID: k141_1331_59
Type: TC
Location: 80485 - 81471 (-)
Type: TC
Location: 80485 - 81471 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium neonatale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.