Cluster: CGMR006697_CGC10
🧬 Cluster Details
- Gene Count: 16
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR006697
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_35 | k141_35_22 | 25118 | 26488 | + | 2.A.2.3.3 |
| TC | k141_35 | k141_35_23 | 27114 | 28385 | + | 4.A.3.2.8 |
| TF | k141_35 | k141_35_24 | 28511 | 29035 | - | HTH_3 |
| NULL(UNKNOWN) | k141_35 | k141_35_25 | 29280 | 29753 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_35 | k141_35_26 | 30179 | 31537 | + | 4.A.1.2.1 |
| TF | k141_35 | k141_35_27 | 31738 | 32727 | + | LacI |
| CAZyme | k141_35 | k141_35_28 | 32755 | 34209 | + | GH32 |
| STP | k141_35 | k141_35_29 | 34199 | 35146 | + | PfkB |
| TC | k141_35 | k141_35_30 | 35377 | 36651 | + | 9.A.40.2.1 |
| pfam | k141_35 | k141_35_31 | 36781 | 37239 | + | dCMP_cyt_deam_1 | MafB19-deam |
| TC | k141_35 | k141_35_32 | 37338 | 38954 | - | 2.A.58.2.2 |
| NULL(UNKNOWN) | k141_35 | k141_35_33 | 39462 | 40493 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_35 | k141_35_34 | 40730 | 41194 | + | 3.A.1.3.25 |
| sulfatase | k141_35 | k141_35_35 | 42030 | 42521 | - | S1_8 |
| pfam | k141_35 | k141_35_36 | 42789 | 43631 | - | Thymidylat_synt |
| TC | k141_35 | k141_35_37 | 43855 | 45003 | - | 1.B.52.2.2 |
Gene ID: k141_35_22
Type: TC
Location: 25118 - 26488 (+)
Type: TC
Location: 25118 - 26488 (+)
Gene ID: k141_35_23
Type: TC
Location: 27114 - 28385 (+)
Type: TC
Location: 27114 - 28385 (+)
Gene ID: k141_35_24
Type: TF
Location: 28511 - 29035 (-)
Type: TF
Location: 28511 - 29035 (-)
Gene ID: k141_35_25
Type:
Location: 29280 - 29753 (+)
Type:
Location: 29280 - 29753 (+)
Gene ID: k141_35_26
Type: TC
Location: 30179 - 31537 (+)
Type: TC
Location: 30179 - 31537 (+)
Gene ID: k141_35_27
Type: TF
Location: 31738 - 32727 (+)
Type: TF
Location: 31738 - 32727 (+)
Gene ID: k141_35_28
Type: CAZyme
Location: 32755 - 34209 (+)
Type: CAZyme
Location: 32755 - 34209 (+)
Gene ID: k141_35_29
Type: STP
Location: 34199 - 35146 (+)
Type: STP
Location: 34199 - 35146 (+)
Gene ID: k141_35_30
Type: TC
Location: 35377 - 36651 (+)
Type: TC
Location: 35377 - 36651 (+)
Gene ID: k141_35_31
Type: pfam
Location: 36781 - 37239 (+)
Type: pfam
Location: 36781 - 37239 (+)
Gene ID: k141_35_32
Type: TC
Location: 37338 - 38954 (-)
Type: TC
Location: 37338 - 38954 (-)
Gene ID: k141_35_33
Type:
Location: 39462 - 40493 (+)
Type:
Location: 39462 - 40493 (+)
Gene ID: k141_35_34
Type: TC
Location: 40730 - 41194 (+)
Type: TC
Location: 40730 - 41194 (+)
Gene ID: k141_35_35
Type: sulfatase
Location: 42030 - 42521 (-)
Type: sulfatase
Location: 42030 - 42521 (-)
Gene ID: k141_35_36
Type: pfam
Location: 42789 - 43631 (-)
Type: pfam
Location: 42789 - 43631 (-)
Gene ID: k141_35_37
Type: TC
Location: 43855 - 45003 (-)
Type: TC
Location: 43855 - 45003 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Clostridiales
Family
Clostridiaceae
Genus
Clostridium
Species
Clostridium neonatale
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.