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Cluster: CGMR006528_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_48179 k141_48179_28 28573 30282 + GH2
STP k141_48179 k141_48179_29 30492 31052 + Sigma70_r2 | Sigma70_r4_2
NULL(UNKNOWN) k141_48179 k141_48179_30 31049 32008 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_48179 k141_48179_31 32055 32879 - 3.A.1.17.3
TC k141_48179 k141_48179_32 32880 33635 - 3.A.1.17.8
pfam k141_48179 k141_48179_33 33662 34660 - NMT1 | NMT1_2
pfam k141_48179 k141_48179_34 34753 35340 + MMR_HSR1 | FeoB_N
CAZyme k141_48179 k141_48179_35 35439 36605 + GT4
NULL(UNKNOWN) k141_48179 k141_48179_36 36622 37152 + NULL(UNKNOWN)
[View Structural Homologs]
pfam k141_48179 k141_48179_37 37164 38240 + Glycos_transf_2 | GtrA_DPMS_TM
CAZyme k141_48179 k141_48179_38 38314 40866 - GT51
Gene ID: k141_48179_28
Type: CAZyme
Location: 28573 - 30282 (+)
Gene ID: k141_48179_29
Type: STP
Location: 30492 - 31052 (+)
Gene ID: k141_48179_30
Type:
Location: 31049 - 32008 (+)
Gene ID: k141_48179_31
Type: TC
Location: 32055 - 32879 (-)
Gene ID: k141_48179_32
Type: TC
Location: 32880 - 33635 (-)
Gene ID: k141_48179_33
Type: pfam
Location: 33662 - 34660 (-)
Gene ID: k141_48179_34
Type: pfam
Location: 34753 - 35340 (+)
Gene ID: k141_48179_35
Type: CAZyme
Location: 35439 - 36605 (+)
Gene ID: k141_48179_36
Type:
Location: 36622 - 37152 (+)
Gene ID: k141_48179_37
Type: pfam
Location: 37164 - 38240 (+)
Gene ID: k141_48179_38
Type: CAZyme
Location: 38314 - 40866 (-)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_A
→
Class
Clostridia
→
Order
UBA1212
→
Family
CASDQQ01
→
Genus
CASDQQ01
→
Species
CASDQQ01 sp949282945

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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