Cluster: CGMR006528_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR006528
- CGC Family ID: CGCFAM_05311
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_79500 | k141_79500_18 | 19792 | 22083 | + | 3.A.5.2.2 |
| TF | k141_79500 | k141_79500_19 | 22211 | 23200 | + | LacI |
| CAZyme | k141_79500 | k141_79500_20 | 23214 | 24296 | + | GH179 |
| pfam | k141_79500 | k141_79500_21 | 24317 | 25030 | + | ThuA |
| pfam | k141_79500 | k141_79500_22 | 25064 | 25984 | + | AP_endonuc_2 |
| CAZyme | k141_79500 | k141_79500_23 | 26020 | 27069 | + | GH179 |
| CAZyme | k141_79500 | k141_79500_24 | 27159 | 29801 | - | GH116 |
Gene ID: k141_79500_18
Type: TC
Location: 19792 - 22083 (+)
Type: TC
Location: 19792 - 22083 (+)
Gene ID: k141_79500_19
Type: TF
Location: 22211 - 23200 (+)
Type: TF
Location: 22211 - 23200 (+)
Gene ID: k141_79500_20
Type: CAZyme
Location: 23214 - 24296 (+)
Type: CAZyme
Location: 23214 - 24296 (+)
Gene ID: k141_79500_21
Type: pfam
Location: 24317 - 25030 (+)
Type: pfam
Location: 24317 - 25030 (+)
Gene ID: k141_79500_22
Type: pfam
Location: 25064 - 25984 (+)
Type: pfam
Location: 25064 - 25984 (+)
Gene ID: k141_79500_23
Type: CAZyme
Location: 26020 - 27069 (+)
Type: CAZyme
Location: 26020 - 27069 (+)
Gene ID: k141_79500_24
Type: CAZyme
Location: 27159 - 29801 (-)
Type: CAZyme
Location: 27159 - 29801 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
UBA1212
Family
CASDQQ01
Genus
CASDQQ01
Species
CASDQQ01 sp949282945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.