Cluster: CGMR006500_CGC7
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: CGMR006500
- CGC Family ID: CGCFAM_05357
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_29338 | k141_29338_38 | 40344 | 41480 | + | CE9 |
| TF | k141_29338 | k141_29338_39 | 41569 | 42447 | - | HTH_1 |
| pfam | k141_29338 | k141_29338_40 | 42593 | 44218 | + | malic | Malic_M |
| TC | k141_29338 | k141_29338_41 | 44255 | 45220 | + | 2.A.69.4.5 |
| STP | k141_29338 | k141_29338_42 | 45381 | 45941 | + | TetR_N |
| TC | k141_29338 | k141_29338_43 | 45991 | 48672 | + | 9.B.74.1.3 |
| TC | k141_29338 | k141_29338_44 | 48763 | 50103 | + | 2.A.79.1.3 |
Gene ID: k141_29338_38
Type: CAZyme
Location: 40344 - 41480 (+)
Type: CAZyme
Location: 40344 - 41480 (+)
Gene ID: k141_29338_39
Type: TF
Location: 41569 - 42447 (-)
Type: TF
Location: 41569 - 42447 (-)
Gene ID: k141_29338_40
Type: pfam
Location: 42593 - 44218 (+)
Type: pfam
Location: 42593 - 44218 (+)
Gene ID: k141_29338_41
Type: TC
Location: 44255 - 45220 (+)
Type: TC
Location: 44255 - 45220 (+)
Gene ID: k141_29338_42
Type: STP
Location: 45381 - 45941 (+)
Type: STP
Location: 45381 - 45941 (+)
Gene ID: k141_29338_43
Type: TC
Location: 45991 - 48672 (+)
Type: TC
Location: 45991 - 48672 (+)
Gene ID: k141_29338_44
Type: TC
Location: 48763 - 50103 (+)
Type: TC
Location: 48763 - 50103 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.