Cluster: CGMR006500_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: CGMR006500
- CGC Family ID: CGCFAM_00040
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_64967 | k141_64967_1 | 268 | 1845 | - | GH73 |
| TC | k141_64967 | k141_64967_2 | 2157 | 3764 | - | 1.C.105.2.7 |
| CAZyme | k141_64967 | k141_64967_3 | 4040 | 5038 | - | GT2 |
| TC | k141_64967 | k141_64967_4 | 5049 | 6464 | - | 2.A.66.2.16 |
| STP | k141_64967 | k141_64967_5 | 6471 | 7586 | - | Pyr_redox |
| CAZyme | k141_64967 | k141_64967_6 | 7708 | 8778 | + | GT4 |
Gene ID: k141_64967_1
Type: CAZyme
Location: 268 - 1845 (-)
Type: CAZyme
Location: 268 - 1845 (-)
Gene ID: k141_64967_2
Type: TC
Location: 2157 - 3764 (-)
Type: TC
Location: 2157 - 3764 (-)
Gene ID: k141_64967_3
Type: CAZyme
Location: 4040 - 5038 (-)
Type: CAZyme
Location: 4040 - 5038 (-)
Gene ID: k141_64967_4
Type: TC
Location: 5049 - 6464 (-)
Type: TC
Location: 5049 - 6464 (-)
Gene ID: k141_64967_5
Type: STP
Location: 6471 - 7586 (-)
Type: STP
Location: 6471 - 7586 (-)
Gene ID: k141_64967_6
Type: CAZyme
Location: 7708 - 8778 (+)
Type: CAZyme
Location: 7708 - 8778 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.