Cluster: CGMR006500_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR006500
- CGC Family ID: CGCFAM_00255
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | k141_46080 | k141_46080_3 | 2175 | 3197 | - | GT4 |
| CAZyme | k141_46080 | k141_46080_4 | 3197 | 4411 | - | GT4 |
| TC | k141_46080 | k141_46080_5 | 4538 | 6265 | - | 8.A.7.1.1 |
| TC | k141_46080 | k141_46080_6 | 6267 | 6533 | - | 8.A.8.1.1 |
| NULL(UNKNOWN) | k141_46080 | k141_46080_7 | 6632 | 6829 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | k141_46080 | k141_46080_8 | 7099 | 9312 | + | 3.A.9.1.2 |
| TC | k141_46080 | k141_46080_9 | 9355 | 9948 | - | 2.A.87.2.3 |
Gene ID: k141_46080_3
Type: CAZyme
Location: 2175 - 3197 (-)
Type: CAZyme
Location: 2175 - 3197 (-)
Gene ID: k141_46080_4
Type: CAZyme
Location: 3197 - 4411 (-)
Type: CAZyme
Location: 3197 - 4411 (-)
Gene ID: k141_46080_5
Type: TC
Location: 4538 - 6265 (-)
Type: TC
Location: 4538 - 6265 (-)
Gene ID: k141_46080_6
Type: TC
Location: 6267 - 6533 (-)
Type: TC
Location: 6267 - 6533 (-)
Gene ID: k141_46080_7
Type:
Location: 6632 - 6829 (-)
Type:
Location: 6632 - 6829 (-)
Gene ID: k141_46080_8
Type: TC
Location: 7099 - 9312 (+)
Type: TC
Location: 7099 - 9312 (+)
Gene ID: k141_46080_9
Type: TC
Location: 9355 - 9948 (-)
Type: TC
Location: 9355 - 9948 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Lactobacillaceae
Genus
Limosilactobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.