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Cluster: CGMR006485_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_10790 k141_10790_55 61630 62472 + CE4
STP k141_10790 k141_10790_56 62683 63252 + Sigma70_r2 | Sigma70_r4_2
NULL(UNKNOWN) k141_10790 k141_10790_57 63249 64457 + NULL(UNKNOWN)
[View Structural Homologs]
TC k141_10790 k141_10790_58 64516 65889 - 2.A.66.1.34
TC k141_10790 k141_10790_59 65864 68377 - 3.A.3.5.15
pfam k141_10790 k141_10790_60 68478 69698 - Metalloenzyme | PhosphMutase
pfam k141_10790 k141_10790_61 70001 70432 + OAD_gamma
TC k141_10790 k141_10790_62 70471 71757 + 3.B.1.1.2
Gene ID: k141_10790_55
Type: CAZyme
Location: 61630 - 62472 (+)
Gene ID: k141_10790_56
Type: STP
Location: 62683 - 63252 (+)
Gene ID: k141_10790_57
Type:
Location: 63249 - 64457 (+)
Gene ID: k141_10790_58
Type: TC
Location: 64516 - 65889 (-)
Gene ID: k141_10790_59
Type: TC
Location: 65864 - 68377 (-)
Gene ID: k141_10790_60
Type: pfam
Location: 68478 - 69698 (-)
Gene ID: k141_10790_61
Type: pfam
Location: 70001 - 70432 (+)
Gene ID: k141_10790_62
Type: TC
Location: 70471 - 71757 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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