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Cluster: CGMR006340_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_409701 k141_409701_33 30944 31420 + 1.A.34.1.3
pfam k141_409701 k141_409701_34 31461 33815 - DEAD_2 | HBB | Helicase_C_2
CAZyme k141_409701 k141_409701_35 33902 35383 - GH77
TC k141_409701 k141_409701_36 35408 36520 - 3.A.1.1.22
TF k141_409701 k141_409701_37 36541 37548 - LacI
TC k141_409701 k141_409701_38 37548 38390 - 3.A.1.1.45
TC k141_409701 k141_409701_39 38390 39241 - 3.A.1.1.45
TC k141_409701 k141_409701_40 39339 40613 - 3.A.1.1.45
Gene ID: k141_409701_33
Type: TC
Location: 30944 - 31420 (+)
Gene ID: k141_409701_34
Type: pfam
Location: 31461 - 33815 (-)
Gene ID: k141_409701_35
Type: CAZyme
Location: 33902 - 35383 (-)
Gene ID: k141_409701_36
Type: TC
Location: 35408 - 36520 (-)
Gene ID: k141_409701_37
Type: TF
Location: 36541 - 37548 (-)
Gene ID: k141_409701_38
Type: TC
Location: 37548 - 38390 (-)
Gene ID: k141_409701_39
Type: TC
Location: 38390 - 39241 (-)
Gene ID: k141_409701_40
Type: TC
Location: 39339 - 40613 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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