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Cluster: CGMR006017_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_143266 k141_143266_16 13116 15731 - 3.A.3.2.21
TC k141_143266 k141_143266_17 16200 17594 + 9.B.18.1.1
pfam k141_143266 k141_143266_18 17744 19069 + LytR_cpsA_psr
CAZyme k141_143266 k141_143266_19 19135 20244 + GT4
CAZyme k141_143266 k141_143266_20 20260 21063 + GT2
CAZyme k141_143266 k141_143266_21 21063 22052 + GT2
TC k141_143266 k141_143266_22 22073 22858 + 3.A.1.103.6
TC k141_143266 k141_143266_23 22880 24775 + 3.A.1.103.1
CAZyme k141_143266 k141_143266_24 24775 26652 + GT111 | GT8
Gene ID: k141_143266_16
Type: TC
Location: 13116 - 15731 (-)
Gene ID: k141_143266_17
Type: TC
Location: 16200 - 17594 (+)
Gene ID: k141_143266_18
Type: pfam
Location: 17744 - 19069 (+)
Gene ID: k141_143266_19
Type: CAZyme
Location: 19135 - 20244 (+)
Gene ID: k141_143266_20
Type: CAZyme
Location: 20260 - 21063 (+)
Gene ID: k141_143266_21
Type: CAZyme
Location: 21063 - 22052 (+)
Gene ID: k141_143266_22
Type: TC
Location: 22073 - 22858 (+)
Gene ID: k141_143266_23
Type: TC
Location: 22880 - 24775 (+)
Gene ID: k141_143266_24
Type: CAZyme
Location: 24775 - 26652 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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