Cluster: CGMR005887_CGC6
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: CGMR005887
- CGC Family ID: CGCFAM_00233
- Continent: Asia
- Source Study: Huang et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | k141_61215 | k141_61215_4 | 1654 | 2982 | - | 2.A.66.1.7 |
| TF | k141_61215 | k141_61215_5 | 3204 | 3908 | + | LytTR |
| pfam | k141_61215 | k141_61215_6 | 3911 | 5245 | + | HATPase_c_5 |
| CAZyme | k141_61215 | k141_61215_7 | 5353 | 7809 | + | GH3 |
| NULL(UNKNOWN) | k141_61215 | k141_61215_8 | 7809 | 8318 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | k141_61215 | k141_61215_9 | 8333 | 11275 | + | GH3 |
Gene ID: k141_61215_4
Type: TC
Location: 1654 - 2982 (-)
Type: TC
Location: 1654 - 2982 (-)
Gene ID: k141_61215_5
Type: TF
Location: 3204 - 3908 (+)
Type: TF
Location: 3204 - 3908 (+)
Gene ID: k141_61215_6
Type: pfam
Location: 3911 - 5245 (+)
Type: pfam
Location: 3911 - 5245 (+)
Gene ID: k141_61215_7
Type: CAZyme
Location: 5353 - 7809 (+)
Type: CAZyme
Location: 5353 - 7809 (+)
Gene ID: k141_61215_8
Type:
Location: 7809 - 8318 (+)
Type:
Location: 7809 - 8318 (+)
Gene ID: k141_61215_9
Type: CAZyme
Location: 8333 - 11275 (+)
Type: CAZyme
Location: 8333 - 11275 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Suilimivivens
Species
Suilimivivens aceti
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| k141_61215_8 | vegetarian > vegan | 1.55136 | 0.00341 |
| k141_61215_9 | vegetarian > vegan | 1.54660 | 0.00341 |