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Cluster: CGMR005887_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_245656 k141_245656_26 29335 29568 + 3.D.1.6.3
pfam k141_245656 k141_245656_27 29659 30345 + dsrm | Ribonuclease_3 | Ribonucleas_3_3
pfam k141_245656 k141_245656_28 30314 33910 + SMC_N | SMC_hinge | AAA_15 | AAA_21 | AAA_23
TC k141_245656 k141_245656_29 33910 34875 + 3.A.5.1.1
STP k141_245656 k141_245656_30 34865 36088 + ACT | PALP
TC k141_245656 k141_245656_31 36209 37075 + 2.A.115.1.2
CAZyme k141_245656 k141_245656_32 37158 38264 + GH25
TF k141_245656 k141_245656_33 38269 39117 + HTH_AraC
STP k141_245656 k141_245656_34 39205 39546 + Sigma70_r4
TC k141_245656 k141_245656_35 39549 40907 + 3.A.5.1.1
Gene ID: k141_245656_26
Type: TC
Location: 29335 - 29568 (+)
Gene ID: k141_245656_27
Type: pfam
Location: 29659 - 30345 (+)
Gene ID: k141_245656_28
Type: pfam
Location: 30314 - 33910 (+)
Gene ID: k141_245656_29
Type: TC
Location: 33910 - 34875 (+)
Gene ID: k141_245656_30
Type: STP
Location: 34865 - 36088 (+)
Gene ID: k141_245656_31
Type: TC
Location: 36209 - 37075 (+)
Gene ID: k141_245656_32
Type: CAZyme
Location: 37158 - 38264 (+)
Gene ID: k141_245656_33
Type: TF
Location: 38269 - 39117 (+)
Gene ID: k141_245656_34
Type: STP
Location: 39205 - 39546 (+)
Gene ID: k141_245656_35
Type: TC
Location: 39549 - 40907 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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