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Cluster: CGMR005887_CGC42

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC k141_43358 k141_43358_3 1317 2936 + 8.A.7.1.1
pfam k141_43358 k141_43358_4 2942 3682 + Glucosamine_iso
CAZyme k141_43358 k141_43358_5 3724 4854 + CE9
TC k141_43358 k141_43358_6 4848 5327 + 4.A.1.2.11
TC k141_43358 k141_43358_7 5405 6877 + 4.A.1.1.7
STP k141_43358 k141_43358_8 7075 8796 + MCPsignal
pfam k141_43358 k141_43358_9 9046 9138 + Hol_Tox
TC k141_43358 k141_43358_10 9850 12279 + 8.A.59.4.1
TC k141_43358 k141_43358_11 12335 13528 + 8.A.59.4.2
Gene ID: k141_43358_3
Type: TC
Location: 1317 - 2936 (+)
Gene ID: k141_43358_4
Type: pfam
Location: 2942 - 3682 (+)
Gene ID: k141_43358_5
Type: CAZyme
Location: 3724 - 4854 (+)
Gene ID: k141_43358_6
Type: TC
Location: 4848 - 5327 (+)
Gene ID: k141_43358_7
Type: TC
Location: 5405 - 6877 (+)
Gene ID: k141_43358_8
Type: STP
Location: 7075 - 8796 (+)
Gene ID: k141_43358_9
Type: pfam
Location: 9046 - 9138 (+)
Gene ID: k141_43358_10
Type: TC
Location: 9850 - 12279 (+)
Gene ID: k141_43358_11
Type: TC
Location: 12335 - 13528 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
k141_43358_5 vegetarian > omnivore 1.35985 0.01389
k141_43358_5 vegetarian > vegan 1.11372 0.00341
k141_43358_6 vegetarian > vegan 3.11099 0.00341

🧭 Explore Read Mapping of CGC

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