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Cluster: CGMR005887_CGC41

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme k141_53908 k141_53908_59 65606 67795 + GH36
CAZyme k141_53908 k141_53908_60 67828 69999 + GH36
TF k141_53908 k141_53908_61 70045 71067 + LacI
TF k141_53908 k141_53908_62 71064 71909 - HTH_AraC | HTH_AraC
TC k141_53908 k141_53908_63 72334 73782 + 3.A.1.1.44
TC k141_53908 k141_53908_64 73889 74893 + 3.A.1.1.11
TC k141_53908 k141_53908_65 74896 75741 + 3.A.1.1.47
pfam k141_53908 k141_53908_66 75787 76968 + GlcNAc_2-epim
CAZyme k141_53908 k141_53908_67 76986 78158 + GH130_1
CAZyme k141_53908 k141_53908_68 78192 79175 + GH130_2
Gene ID: k141_53908_59
Type: CAZyme
Location: 65606 - 67795 (+)
Gene ID: k141_53908_60
Type: CAZyme
Location: 67828 - 69999 (+)
Gene ID: k141_53908_61
Type: TF
Location: 70045 - 71067 (+)
Gene ID: k141_53908_62
Type: TF
Location: 71064 - 71909 (-)
Gene ID: k141_53908_63
Type: TC
Location: 72334 - 73782 (+)
Gene ID: k141_53908_64
Type: TC
Location: 73889 - 74893 (+)
Gene ID: k141_53908_65
Type: TC
Location: 74896 - 75741 (+)
Gene ID: k141_53908_66
Type: pfam
Location: 75787 - 76968 (+)
Gene ID: k141_53908_67
Type: CAZyme
Location: 76986 - 78158 (+)
Gene ID: k141_53908_68
Type: CAZyme
Location: 78192 - 79175 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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